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BMCBI
2010
104views more  BMCBI 2010»
15 years 6 months ago
Parameters for accurate genome alignment
Background: Genome sequence alignments form the basis of much research. Genome alignment depends on various mundane but critical choices, such as how to mask repeats and which sco...
Martin C. Frith, Michiaki Hamada, Paul Horton
BMCBI
2007
233views more  BMCBI 2007»
15 years 6 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
JAIR
2006
157views more  JAIR 2006»
15 years 6 months ago
Decision-Theoretic Planning with non-Markovian Rewards
A decision process in which rewards depend on history rather than merely on the current state is called a decision process with non-Markovian rewards (NMRDP). In decisiontheoretic...
Sylvie Thiébaux, Charles Gretton, John K. S...
MMS
2006
15 years 6 months ago
Collaborative image retrieval via regularized metric learning
In content-based image retrieval (CBIR), relevant images are identified based on their similarities to query images. Most CBIR algorithms are hindered by the semantic gap between ...
Luo Si, Rong Jin, Steven C. H. Hoi, Michael R. Lyu
IJWIS
2007
153views more  IJWIS 2007»
15 years 6 months ago
A security framework for agent-based systems
Purpose – This paper aims to address some security issues in open systems such as service-oriented applications and grid computing. It proposes a security framework for these sy...
Jamal Bentahar, Francesca Toni, John-Jules Ch. Mey...