In this paper we show how to extend Coloured Petri Nets (CP-nets), with three new modelling primitives—place capacities, test arcs and inhibitor arcs. The new modelling primitiv...
Background: The small sample sizes often used for microarray experiments result in poor estimates of variance if each gene is considered independently. Yet accurately estimating v...
Maureen A. Sartor, Craig R. Tomlinson, Scott C. We...
Although two-color uorescent DNA microarrays are now standard equipment in many molecular biology laboratories, methods for identifying differentially expressed genes in microarra...
Trey Ideker, Vesteinn Thorsson, Andrew F. Siegel, ...
Background: Gene set enrichment testing has helped bridge the gap from an individual gene to a systems biology interpretation of microarray data. Although gene sets are defined a ...
This paper addresses the problem of classification in situations where the data distribution is not homogeneous: Data instances might come from different locations or times, and t...