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» The Expressive Rate of Constraints
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BMCBI
2004
146views more  BMCBI 2004»
15 years 6 months ago
Multivariate search for differentially expressed gene combinations
Background: To identify differentially expressed genes, it is standard practice to test a twosample hypothesis for each gene with a proper adjustment for multiple testing. Such te...
Yuanhui Xiao, Robert D. Frisina, Alexander Gordon,...
EDBTW
2006
Springer
15 years 8 months ago
Efficient Integrity Checking over XML Documents
The need for incremental constraint maintenance within collections of semi-structured documents has been ever increasing in the last years due to the widespread diffusion of XML. T...
Daniele Braga, Alessandro Campi, Davide Martinengh...
FOSSACS
2008
Springer
15 years 8 months ago
What Else Is Decidable about Integer Arrays?
We introduce a new decidable logic for reasoning about infinite arrays of integers. The logic is in the first-order fragment and allows (1) Presburger constraints on existentially...
Peter Habermehl, Radu Iosif, Tomás Vojnar
RECOMB
2002
Springer
16 years 6 months ago
Discovering local structure in gene expression data: the order-preserving submatrix problem
This paper concerns the discovery of patterns in gene expression matrices, in which each element gives the expression level of a given gene in a given experiment. Most existing me...
Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Y...
BMCBI
2004
135views more  BMCBI 2004»
15 years 6 months ago
Determination of the differentially expressed genes in microarray experiments using local FDR
Background: Thousands of genes in a genomewide data set are tested against some null hypothesis, for detecting differentially expressed genes in microarray experiments. The expect...
Julie Aubert, Avner Bar-Hen, Jean-Jacques Daudin, ...