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» The Equivalence between Biology and Computation
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JSCIC
2008
107views more  JSCIC 2008»
15 years 6 months ago
A Hierarchy of Approximations of the Master Equation Scaled by a Size Parameter
Solutions of the master equation are approximated using a hierarchy of models based on the solution of ordinary differential equations: the macroscopic equations, the linear noise...
Lars Ferm, Per Lötstedt, Andreas Hellander
RTA
2005
Springer
15 years 12 months ago
The Algebra of Equality Proofs
Proofs of equalities may be built from assumptions using proof rules for reflexivity, symmetry, and transitivity. Reflexivity is an axiom proving x=x for any x; symmetry is a 1-p...
Aaron Stump, Li-Yang Tan
BMCBI
2010
119views more  BMCBI 2010»
15 years 6 months ago
A comparison of internal validation techniques for multifactor dimensionality reduction
Background: It is hypothesized that common, complex diseases may be due to complex interactions between genetic and environmental factors, which are difficult to detect in high-di...
Stacey J. Winham, Andrew J. Slater, Alison A. Mots...
IPPS
2010
IEEE
15 years 4 months ago
Acceleration of spiking neural networks in emerging multi-core and GPU architectures
Recently, there has been strong interest in large-scale simulations of biological spiking neural networks (SNN) to model the human brain mechanisms and capture its inference capabi...
Mohammad A. Bhuiyan, Vivek K. Pallipuram, Melissa ...
RECOMB
2006
Springer
16 years 6 months ago
A Parsimony Approach to Genome-Wide Ortholog Assignment
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...