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BMCBI
2007
113views more  BMCBI 2007»
15 years 6 months ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
BMCBI
2007
126views more  BMCBI 2007»
15 years 6 months ago
Multiple non-collinear TF-map alignments of promoter regions
Background: The analysis of the promoter sequence of genes with similar expression patterns is a basic tool to annotate common regulatory elements. Multiple sequence alignments ar...
Enrique Blanco, Roderic Guigó, Xavier Messe...
BMCBI
2007
137views more  BMCBI 2007»
15 years 6 months ago
PlnTFDB: an integrative plant transcription factor database
Background: Transcription factors (TFs) are key regulatory proteins that enhance or repress the transcriptional rate of their target genes by binding to specific promoter regions ...
Diego Mauricio Riaño-Pachón, Sloboda...
JSC
2006
52views more  JSC 2006»
15 years 6 months ago
Markov bases of three-way tables are arbitrarily complicated
We show the following two universality statements on the entry-ranges and Markov bases of spaces of 3-way contingency tables with fixed 2-margins: (1) For any finite set D of nonn...
Jesús A. De Loera, Shmuel Onn
JODL
2000
65views more  JODL 2000»
15 years 6 months ago
Nature: a prototype digital archive
In response to the proposal to digitise the journal Nature (1869->1992), published by Macmillan, a pilot project was commissioned to discover the technical issues and ascertain...
Ross MacIntyre, Simon Tanner