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ALMOB
2006
138views more  ALMOB 2006»
15 years 6 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
BMCBI
2006
75views more  BMCBI 2006»
15 years 6 months ago
A machine learning strategy to identify candidate binding sites in human protein-coding sequence
Background: The splicing of RNA transcripts is thought to be partly promoted and regulated by sequences embedded within exons. Known sequences include binding sites for SR protein...
Thomas Down, Bernard Leong, Tim J. P. Hubbard
CAD
2007
Springer
15 years 6 months ago
Direct extraction of surface meshes from implicitly represented heterogeneous volumes
This paper describes a novel algorithm to extract surface meshes directly from implicitly represented heterogeneous models made of different constituent materials. Our approach ca...
Charlie C. L. Wang
IJHPCA
2007
114views more  IJHPCA 2007»
15 years 6 months ago
An Approach To Data Distributions in Chapel
A key characteristic of today’s high performance computing systems is a physically distributed memory, which makes the efficient management of locality essential for taking adv...
R. E. Diaconescu, Hans P. Zima
TVCG
2008
151views more  TVCG 2008»
15 years 6 months ago
Visualization of Particle Interactions in Granular Media
Interaction between particles in so-called granular media, such as soil and sand, plays an important role in the context of geomechanical phenomena and numerous industrial applicat...
Holger A. Meier, Michael Schlemmer, Christian Wagn...