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BMCBI
2010
183views more  BMCBI 2010»
15 years 6 months ago
SOPRA: Scaffolding algorithm for paired reads via statistical optimization
Background: High throughput sequencing (HTS) platforms produce gigabases of short read (<100 bp) data per run. While these short reads are adequate for resequencing application...
Adel Dayarian, Todd P. Michael, Anirvan M. Sengupt...
BMCBI
2008
166views more  BMCBI 2008»
15 years 6 months ago
Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies
Background: The analysis of large-scale data sets via clustering techniques is utilized in a number of applications. Biclustering in particular has emerged as an important problem...
Peter A. DiMaggio Jr., Scott R. McAllister, Christ...
JPDC
2007
96views more  JPDC 2007»
15 years 6 months ago
Optimal pipeline decomposition and adaptive network mapping to support distributed remote visualization
This paper discusses algorithmic and implementation aspects of a distributed remote visualization system that optimally decomposes and adaptively maps the visualization pipeline t...
Mengxia Zhu, Qishi Wu, Nageswara S. V. Rao, S. Sit...
ICDE
2007
IEEE
193views Database» more  ICDE 2007»
16 years 8 months ago
Categorization and Optimization of Synchronization Dependencies in Business Processes
requirement. Furthermore, programming using sequence constructs normally produce nested structures and The current approachfor modeling synchronization in scattered code, especiall...
Qinyi Wu, Calton Pu, Akhil Sahai, Roger S. Barga
SIGMOD
2008
ACM
145views Database» more  SIGMOD 2008»
16 years 6 months ago
Optimizing complex queries with multiple relation instances
Today's query processing engines do not take advantage of the multiple occurrences of a relation in a query to improve performance. Instead, each instance is treated as a dis...
Yu Cao, Gopal C. Das, Chee Yong Chan, Kian-Lee Tan