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» The Complexity of Partition Functions
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BMCBI
2006
98views more  BMCBI 2006»
15 years 7 months ago
Optimised amino acid specific weighting factors for unbound protein docking
Background: One of the most challenging aspects of protein-protein docking is the inclusion of flexibility into the docking procedure. We developed a postfilter where the grid-rep...
Philipp Heuser, Dietmar Schomburg
BMCBI
2006
122views more  BMCBI 2006»
15 years 7 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2011
15 years 1 months ago
PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Background: The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progr...
Botond Sipos, Tim Massingham, Gregory E. Jordan, N...
IACR
2011
139views more  IACR 2011»
14 years 6 months ago
Improved Meet-in-the-Middle Cryptanalysis of KTANTAN
We revisit meet-in-the-middle attacks on block ciphers and recent developments in meet-in-the-middle preimage attacks on hash functions. Despite the presence of a secret key in the...
Lei Wei, Christian Rechberger, Jian Guo 0001, Hong...
PODS
2012
ACM
297views Database» more  PODS 2012»
13 years 9 months ago
Query-based data pricing
Data is increasingly being bought and sold online, and Webbased marketplace services have emerged to facilitate these activities. However, current mechanisms for pricing data are ...
Paraschos Koutris, Prasang Upadhyaya, Magdalena Ba...