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IPPS
2007
IEEE
16 years 1 months ago
Reconfigurable Architecture for Biological Sequence Comparison in Reduced Memory Space
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
Azzedine Boukerche, Jan Mendonca Correa, Alba Cris...
IPPS
2007
IEEE
16 years 1 months ago
Online Aggregation over Trees
Consider a distributed network with nodes arranged in a tree, and each node having a local value. We consider the problem of aggregating values (e.g., summing values) from all nod...
C. Greg Plaxton, Mitul Tiwari, Praveen Yalagandula
IPPS
2007
IEEE
16 years 1 months ago
Performance Modelling of Necklace Hypercubes
The necklace hypercube has recently been introduced as an attractive alternative to the well-known hypercube. Previous research on this network topology has mainly focused on topo...
Sina Meraji, Hamid Sarbazi-Azad, Ahmad Patooghy
IPPS
2007
IEEE
16 years 1 months ago
Measuring the Robustness of Resource Allocations in a Stochastic Dynamic Environment
Heterogeneous distributed computing systems often must operate in an environment where system parameters are subject to uncertainty. Robustness can be defined as the degree to wh...
Jay Smith, Luis Diego Briceno, Anthony A. Maciejew...
IPPS
2007
IEEE
16 years 1 months ago
Proximity-Aware Collaborative Multicast for Small P2P Communities
In this paper we describe a novel solution for delay sensitive one-to-many content distribution in P2P networks based on cooperative m-ary trees. Our scheme maximizes the overall ...
Francisco de Asís López-Fuentes, Eck...
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