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BIBE
2008
IEEE
272views Bioinformatics» more  BIBE 2008»
16 years 26 days ago
Design and implementation of the Smith-Waterman algorithm on the CUDA-compatible GPU
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uniï...
Yuma Munekawa, Fumihiko Ino, Kenichi Hagihara
CISIS
2008
IEEE
16 years 25 days ago
Adaptive Computational Chemotaxis in Bacterial Foraging Algorithm
Some researchers have illustrated how individual and groups of bacteria forage for nutrients and to model it as a distributed optimization process, which is called the Bacterial F...
Sambarta Dasgupta, Arijit Biswas, Ajith Abraham, S...
IPPS
2008
IEEE
16 years 24 days ago
Parallelized preprocessing algorithms for high-density oligonucleotide arrays
Studies of gene expression using high-density oligonucleotide microarrays have become standard in a variety of biological contexts. The data recorded using the microarray techniqu...
Markus Schmidberger, Ulrich Mansmann
ICC
2007
IEEE
137views Communications» more  ICC 2007»
16 years 21 days ago
A Novel Algorithm and Architecture for High Speed Pattern Matching in Resource-Limited Silicon Solution
— Network Intrusion Detection Systems (NIDS) are more and more important for identifying and preventing the malicious attacks over the network. This paper proposes a novel cost-e...
Nen-Fu Huang, Yen-Ming Chu, Chi-Hung Tsai, Chen-Yi...
ESTIMEDIA
2005
Springer
15 years 12 months ago
Custom Processor Design Using NISC: A Case-Study on DCT algorithm
Designing Application-Specific Instruction-set Processors (ASIPs) usually requires designing a custom datapath, and modifying instruction-set, instruction decoder, and compiler. A...
Bita Gorjiara, Daniel D. Gajski