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IPPS
2008
IEEE
16 years 23 days ago
Parallel mining of closed quasi-cliques
Graph structure can model the relationships among a set of objects. Mining quasi-clique patterns from large dense graph data makes sense with respect to both statistic and applica...
Yuzhou Zhang, Jianyong Wang, Zhiping Zeng, Lizhu Z...
ISSAC
2007
Springer
107views Mathematics» more  ISSAC 2007»
16 years 15 days ago
A disk-based parallel implementation for direct condensation of large permutation modules
Through the use of a new disk-based method for enumerating very large orbits, condensation for orbits with tens of billions of elements can be performed. The algorithm is novel in...
Eric Robinson, Jürgen Müller 0004, Gene ...
CCGRID
2006
IEEE
16 years 12 days ago
Using Multiple Grid Resources for Bioinformatics Applications in GADU
During the past decade, the scientific community has witnessed the rapid accumulation of gene sequence data and data related to physiology and biochemistry of organisms. Bioinform...
Dinanath Sulakhe, Alex Rodriguez, Michael Wilde, I...
CIBCB
2006
IEEE
16 years 12 days ago
Aggregating Homologous Protein Families in Evolutionary Reconstructions of Herpesviruses
Abstract–Protein families can be used to reconstruct evolutionary histories of organisms. The accuracy of protein assignment to such families is critical for the success of such ...
Boris Mirkin, Renata da Silva Camargo, Trevor I. F...
NCA
2006
IEEE
16 years 11 days ago
Parallelization of Geant4 Using TOP-C and Marshalgen
Geant4 is a very large, highly accurate toolkit for Monte Carlo simulation of particle-matter interaction. It has been applied to high-energy physics, cosmic ray modeling, radiati...
Gene Cooperman, Viet Ha Nguyen, Igor Malioutov