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» Tests for gene clustering
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KDD
2005
ACM
157views Data Mining» more  KDD 2005»
16 years 7 months ago
A fast kernel-based multilevel algorithm for graph clustering
Graph clustering (also called graph partitioning) -- clustering the nodes of a graph -- is an important problem in diverse data mining applications. Traditional approaches involve...
Inderjit S. Dhillon, Yuqiang Guan, Brian Kulis
CVPR
2008
IEEE
16 years 8 months ago
Learning human actions via information maximization
In this paper, we present a novel approach for automatically learning a compact and yet discriminative appearance-based human action model. A video sequence is represented by a ba...
Jingen Liu, Mubarak Shah
NAR
2011
225views Computer Vision» more  NAR 2011»
14 years 9 months ago
IsoBase: a database of functionally related proteins across PPI networks
We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
Daniel Park, Rohit Singh, Michael Baym, Chung-Shou...
RECOMB
2004
Springer
16 years 6 months ago
Computational identification of evolutionarily conserved exons
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Adam C. Siepel, David Haussler
BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
15 years 6 months ago
Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
Antonina Mitrofanova, Samantha Kleinberg, Jane Car...