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» Tests for gene clustering
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IJON
2010
148views more  IJON 2010»
15 years 3 months ago
Integration of heterogeneous data sources for gene function prediction using decision templates and ensembles of learning machin
Several solutions have been proposed to exploit the availability of heterogeneous sources of biomolecular data for gene function prediction, but few attention has been dedicated t...
Matteo Re, Giorgio Valentini
SDM
2003
SIAM
110views Data Mining» more  SDM 2003»
15 years 7 months ago
Mixture Models and Frequent Sets: Combining Global and Local Methods for 0-1 Data
We study the interaction between global and local techniques in data mining. Specifically, we study the collections of frequent sets in clusters produced by a probabilistic clust...
Jaakko Hollmén, Jouni K. Seppänen, Hei...
SC
2005
ACM
16 years 1 days ago
A Scalable Distributed Parallel Breadth-First Search Algorithm on BlueGene/L
Many emerging large-scale data science applications require searching large graphs distributed across multiple memories and processors. This paper presents a distributed breadth...
Andy Yoo, Edmond Chow, Keith W. Henderson, Will Mc...
BICOB
2009
Springer
15 years 11 months ago
Computational Prediction of Genes Translationally Regulated by Cytoplasmic Polyadenylation Elements
Cytoplasmic post-transcriptional modification of mRNA transcripts in the form of polyadenylated (poly(A)) tails plays a key role in their translational control. The timing and degr...
Eric C. Rouchka, Xiangping Wang, James H. Graham, ...
BMCBI
2010
160views more  BMCBI 2010»
15 years 6 months ago
Annotation of gene promoters by integrative data-mining of ChIP-seq Pol-II enrichment data
Background: Use of alternative gene promoters that drive widespread cell-type, tissue-type or developmental gene regulation in mammalian genomes is a common phenomenon. Chromatin ...
Ravi Gupta, Priyankara Wikramasinghe, Anirban Bhat...