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BMCBI
2010
155views more  BMCBI 2010»
15 years 6 months ago
A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer
Background: In the study of cancer genomics, gene expression microarrays, which measure thousands of genes in a single assay, provide abundant information for the investigation of...
Fan Shi, Christopher Leckie, Geoff MacIntyre, Izha...
OOPSLA
2004
Springer
16 years 3 days ago
Chianti: a tool for change impact analysis of java programs
This paper reports on the design and implementation of Chianti, a change impact analysis tool for Java that is implemented in the context of the Eclipse environment. Chianti analy...
Xiaoxia Ren, Fenil Shah, Frank Tip, Barbara G. Ryd...
BMCBI
2005
107views more  BMCBI 2005»
15 years 6 months ago
Identifying differential expression in multiple SAGE libraries: an overdispersed log-linear model approach
Background: In testing for differential gene expression involving multiple serial analysis of gene expression (SAGE) libraries, it is critical to account for both between and with...
Jun Lu, John K. Tomfohr, Thomas B. Kepler
SODA
2010
ACM
208views Algorithms» more  SODA 2010»
16 years 4 months ago
Correlation Robust Stochastic Optimization
We consider a robust model proposed by Scarf, 1958, for stochastic optimization when only the marginal probabilities of (binary) random variables are given, and the correlation be...
Shipra Agrawal, Yichuan Ding, Amin Saberi, Yinyu Y...
175
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IPPS
2008
IEEE
16 years 1 months ago
Automatic middleware deployment planning on heterogeneous platforms
Abstract— The use of many distributed, heterogeneous resources as a large collective platform offers great potential. A key issue for these grid platforms is middleware scalabili...
Pushpinder-Kaur Chouhan, Eddy Caron, Fréd&e...