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BMCBI
2008
109views more  BMCBI 2008»
15 years 6 months ago
ConStruct: Improved construction of RNA consensus structures
Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
BMCBI
2008
200views more  BMCBI 2008»
15 years 6 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
DAC
2008
ACM
16 years 7 months ago
Transistor level gate modeling for accurate and fast timing, noise, and power analysis
Current source based cell models are becoming a necessity for accurate timing and noise analysis at 65nm and below. Voltage waveform shapes are increasingly more difficult to repr...
S. Raja, F. Varadi, Murat R. Becer, Joao Geada
PPOPP
2009
ACM
16 years 7 months ago
An efficient transactional memory algorithm for computing minimum spanning forest of sparse graphs
Due to power wall, memory wall, and ILP wall, we are facing the end of ever increasing single-threaded performance. For this reason, multicore and manycore processors are arising ...
Seunghwa Kang, David A. Bader
IPSN
2010
Springer
16 years 1 months ago
KleeNet: discovering insidious interaction bugs in wireless sensor networks before deployment
Complex interactions and the distributed nature of wireless sensor networks make automated testing and debugging before deployment a necessity. A main challenge is to detect bugs ...
Raimondas Sasnauskas, Olaf Landsiedel, Muhammad Ha...