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RECOMB
2008
Springer
16 years 7 months ago
Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations
We describe algorithms to explore the space of all possible reconciliations between a gene tree and a species tree. We propose an algorithm for generating a random reconciliation, ...
Jean-Philippe Doyon, Cedric Chauve, Sylvie Hamel
STOC
2006
ACM
138views Algorithms» more  STOC 2006»
16 years 7 months ago
Searching dynamic point sets in spaces with bounded doubling dimension
We present a new data structure that facilitates approximate nearest neighbor searches on a dynamic set of points in a metric space that has a bounded doubling dimension. Our data...
Richard Cole, Lee-Ad Gottlieb
OSDI
2006
ACM
16 years 7 months ago
XFI: Software Guards for System Address Spaces
XFI is a comprehensive protection system that offers both flexible access control and fundamental integrity guarantees, at any privilege level and even for legacy code in commodit...
Úlfar Erlingsson, George C. Necula, Mart&ia...
SODA
2010
ACM
214views Algorithms» more  SODA 2010»
16 years 4 months ago
A Fourier space algorithm for solving quadratic assignment problems
The quadratic assignment problem (QAP) is a central problem in combinatorial optimization. Several famous computationally hard tasks, such as graph matching, partitioning, and the...
Risi Kondor
CASON
2009
IEEE
16 years 1 months ago
A Space-Based Layout Algorithm for the Drawing of Co-citation Networks
We present in this paper a drawing algorithm to represent graphically co-citation networks (scientograms). These networks have some interesting and unusual topological properties ...
Arnaud Quirin, Oscar Cordón