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» Systems biology, models, and concurrency
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PODC
1990
ACM
15 years 10 months ago
Sharing Memory Robustly in Message-Passing Systems
Emulators that translate algorithms from the shared-memory model to two different message-passing models are presented. Both are achieved by implementing a wait-free, atomic, singl...
Hagit Attiya, Amotz Bar-Noy, Danny Dolev
SASO
2008
IEEE
16 years 26 days ago
The Meaning of Semiochemicals to the Design of Self-Organizing Systems
In biology, many organisms coordinate their interactions in a self-organizing and emergent way solely by means of indirect communication based on chemical substances. These so-cal...
Holger Kasinger, Bernhard Bauer, Jörg Denzing...
ISSTA
1998
ACM
15 years 10 months ago
Verifying Systems with Integer Constraints and Boolean Predicates: A Composite Approach
Symbolic model checking has proved highly successful for large nite-state systems, in which states can be compactly encoded using binary decision diagrams (BDDs) or their variants...
Tevfik Bultan, Richard Gerber, Christopher League
WAN
1998
Springer
15 years 10 months ago
Performance Analysis of Wavefront Algorithms on Very-Large Scale Distributed Systems
We present a model for the parallel performance of algorithms that consist of concurrent, two-dimensional wavefronts implemented in a message passing environment. The model combine...
Adolfy Hoisie, Olaf M. Lubeck, Harvey J. Wasserman
RECOMB
2003
Springer
16 years 6 months ago
A multi-expert system for the automatic detection of protein domains from sequence information
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...
Niranjan Nagarajan, Golan Yona