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BMCBI
2007
107views more  BMCBI 2007»
15 years 6 months ago
Reuse of structural domain-domain interactions in protein networks
Background: Protein interactions are thought to be largely mediated by interactions between structural domains. Databases such as iPfam relate interactions in protein structures t...
Benjamin Schuster-Böckler, Alex Bateman
192
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CORR
2010
Springer
160views Education» more  CORR 2010»
15 years 6 months ago
Scalable Probabilistic Databases with Factor Graphs and MCMC
Incorporating probabilities into the semantics of incomplete databases has posed many challenges, forcing systems to sacrifice modeling power, scalability, or treatment of relatio...
Michael L. Wick, Andrew McCallum, Gerome Miklau
DEBU
2008
125views more  DEBU 2008»
15 years 6 months ago
Querying XML in Timber
In this paper, we describe the TIMBER XML database system implemented at University of Michigan. TIMBER was one of the first native XML database systems, designed from the ground ...
Yuqing Wu, Stelios Paparizos, H. V. Jagadish
IANDC
2006
121views more  IANDC 2006»
15 years 6 months ago
Comparing operational models of name-passing process calculi
We study three operational models of name-passing process calculi: coalgebras on (pre)sheaves, indexed labelled transition systems, and history dependent automata. The coalgebraic...
Marcelo P. Fiore, Sam Staton
CVGIP
2007
99views more  CVGIP 2007»
15 years 6 months ago
Meshless geometric subdivision
Point-based surface processing has developed into an attractive alternative to mesh-based processing techniques for a number of geometric modeling applications. By working with po...
Carsten Moenning, Facundo Mémoli, Guillermo...