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NAR
2006
120views more  NAR 2006»
15 years 6 months ago
TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...
Blaise T. F. Alako, Daphne Rainey, Harm Nijveen, J...
BMCBI
2005
100views more  BMCBI 2005»
15 years 6 months ago
Speeding disease gene discovery by sequence based candidate prioritization
Background: Regions of interest identified through genetic linkage studies regularly exceed 30 centimorgans in size and can contain hundreds of genes. Traditionally this number is...
Euan A. Adie, Richard R. Adams, Kathryn L. Evans, ...
BMCBI
2005
152views more  BMCBI 2005»
15 years 6 months ago
Ranking the whole MEDLINE database according to a large training set using text indexing
Background: The MEDLINE database contains over 12 million references to scientific literature, ut 3/4 of recent articles including an abstract of the publication. Retrieval of ent...
Brian P. Suomela, Miguel A. Andrade
BMCBI
2004
150views more  BMCBI 2004»
15 years 6 months ago
Graph-based iterative Group Analysis enhances microarray interpretation
Background: One of the most time-consuming tasks after performing a gene expression experiment is the biological interpretation of the results by identifying physiologically impor...
Rainer Breitling, Anna Amtmann, Pawel Herzyk
COLING
2002
15 years 6 months ago
The LinGO Redwoods Treebank: Motivation and Preliminary Applications
The LinGO Redwoods initiative is a seed activity in the design and development of a new type of treebank. While several medium- to large-scale treebanks exist for English (and for...
Stephan Oepen, Kristina Toutanova, Stuart M. Shieb...