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RECOMB
2003
Springer
16 years 6 months ago
Modeling dependencies in protein-DNA binding sites
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of transcription regulation. This includes methods for discover...
Yoseph Barash, Gal Elidan, Nir Friedman, Tommy Kap...
RECOMB
2001
Springer
16 years 6 months ago
Towards predicting coiled-coil protein interactions
Protein-protein interactions play a central role in many cellular functions, and as whole-genome data accumulates, computational methods for predicting these interactions become i...
Mona Singh, Peter S. Kim
BMCBI
2007
86views more  BMCBI 2007»
15 years 6 months ago
Detecting microsatellites within genomes: significant variation among algorithms
Background: Microsatellites are short, tandemly-repeated DNA sequences which are widely distributed among genomes. Their structure, role and evolution can be analyzed based on exh...
Sébastien Leclercq, Eric Rivals, Philippe J...
BMCBI
2005
82views more  BMCBI 2005»
15 years 6 months ago
A novel method for prokaryotic promoter prediction based on DNA stability
Background: In the post-genomic era, correct gene prediction has become one of the biggest challenges in genome annotation. Improved promoter prediction methods can be one step to...
Aditi Kanhere, Manju Bansal
ICDE
2006
IEEE
155views Database» more  ICDE 2006»
16 years 7 months ago
Mining, Indexing, and Similarity Search in Graphs and Complex Structures
Jiawei Han, Xifeng Yan, Philip S. Yu