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BMCBI
2004
127views more  BMCBI 2004»
15 years 6 months ago
MolTalk - a programming library for protein structures and structure analysis
Background: Two of the mostly unsolved but increasingly urgent problems for modern biologists are a) to quickly and easily analyse protein structures and b) to comprehensively min...
Alexander V. Diemand, Holger Scheib
BMCBI
2007
119views more  BMCBI 2007»
15 years 6 months ago
Efficacy of different protein descriptors in predicting protein functional families
Background: Sequence-derived structural and physicochemical descriptors have frequently been used in machine learning prediction of protein functional families, thus there is a ne...
Serene A. K. Ong, Hong Huang Lin, Yu Zong Chen, Ze...
BMCBI
2004
128views more  BMCBI 2004»
15 years 6 months ago
Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in struc
Background: We establish that the occurrence of protein folds among genomes can be accurately described with a Weibull function. Systems which exhibit Weibull character can be int...
Artem Cherkasov, Shannan J. Ho Sui, Robert C. Brun...
ICCAD
2006
IEEE
125views Hardware» more  ICCAD 2006»
16 years 3 months ago
Performances improvement of FPGA using novel multilevel hierarchical interconnection structure
This paper presents a new Multilevel hierarchical FPGA (MFPGA) architecture that unifies two unidirectional programmable networks: A predictible downward network based on the But...
Hayder Mrabet, Zied Marrakchi, Pierre Souillot, Ha...
JCB
2000
129views more  JCB 2000»
15 years 6 months ago
Prediction of RNA Base Pairing Probabilities on Massively Parallel Computers
We present an implementation of McCaskill's algorithm for computing the base pair probabilities of an RNA molecule for massively parallel message passing architectures. The p...
Martin Fekete, Ivo L. Hofacker, Peter F. Stadler