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ICASSP
2007
IEEE
16 years 19 days ago
Toward Turbo Decoding of RNA Secondary Structure
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
CSB
2005
IEEE
192views Bioinformatics» more  CSB 2005»
15 years 12 months ago
RNAMute: RNA Secondary Structure Mutation Analysis Tool
RNAMute is an interactive web tool written in Java that calculates the secondary structure of all single point mutations, given an RNA sequence, and organizes them into categories...
Alexander Churkin, Ornit Elgad, Oshrat Petgho, Dan...
ICDM
2008
IEEE
182views Data Mining» more  ICDM 2008»
16 years 22 days ago
Multiple-Instance Regression with Structured Data
We present a multiple-instance regression algorithm that models internal bag structure to identify the items most relevant to the bag labels. Multiple-instance regression (MIR) op...
Kiri L. Wagstaff, Terran Lane, Alex Roper
NIPS
2008
15 years 7 months ago
Structured ranking learning using cumulative distribution networks
Ranking is at the heart of many information retrieval applications. Unlike standard regression or classification in which we predict outputs independently, in ranking we are inter...
Jim C. Huang, Brendan J. Frey
AAAI
2010
15 years 6 months ago
Fast Conditional Density Estimation for Quantitative Structure-Activity Relationships
Many methods for quantitative structure-activity relationships (QSARs) deliver point estimates only, without quantifying the uncertainty inherent in the prediction. One way to qua...
Fabian Buchwald, Tobias Girschick, Eibe Frank, Ste...