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» Structural Complexity of AvgBPP
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JCC
1998
71views more  JCC 1998»
15 years 6 months ago
Docking small ligands in flexible binding sites
: A novel procedure for docking ligands in a flexible binding site is presented. It relies on conjugate gradient minimization, during which nonbonded interactions are gradually swi...
Joannis Apostolakis, Andreas Plückthun, Amede...
TELSYS
2002
128views more  TELSYS 2002»
15 years 6 months ago
An Evaluation of Shared Multicast Trees with Multiple Cores
Native multicast routing protocols have been built and deployed using two basic types of trees: singlesource, shortest-path trees and shared, core-based trees. Core-based multicas...
Daniel Zappala, Aaron Fabbri, Virginia Mary Lo
AISS
2010
146views more  AISS 2010»
15 years 2 months ago
Zatara, the Plug-in-able Eventually Consistent Distributed Database
With the proliferation of the computer Cloud, new software delivery methods were created. In order to build software to fit into one of these models, a scalable, easy to deploy st...
Bogdan Carstoiu, Dorin Carstoiu
BMCBI
2010
97views more  BMCBI 2010»
15 years 2 months ago
A semi-parametric Bayesian model for unsupervised differential co-expression analysis
Background: Differential co-expression analysis is an emerging strategy for characterizing disease related dysregulation of gene expression regulatory networks. Given pre-defined ...
Johannes M. Freudenberg, Siva Sivaganesan, Michael...
BMCBI
2010
131views more  BMCBI 2010»
15 years 2 months ago
Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity
Background: The dynamic motions of many proteins are central to their function. It therefore follows that the dynamic requirements of a protein are evolutionary constrained. In or...
Márton Münz, Rune B. Lyngsø, Jo...