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RECOMB
2004
Springer
16 years 6 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
RECOMB
2003
Springer
16 years 6 months ago
Joint classifier and feature optimization for cancer diagnosis using gene expression data
Recent research has demonstrated quite convincingly that accurate cancer diagnosis can be achieved by constructing classifiers that are designed to compare the gene expression pro...
Balaji Krishnapuram, Lawrence Carin, Alexander J. ...
STOC
2005
ACM
135views Algorithms» more  STOC 2005»
16 years 6 months ago
On the bias of traceroute sampling: or, power-law degree distributions in regular graphs
Understanding the graph structure of the Internet is a crucial step for building accurate network models and designing efficient algorithms for Internet applications. Yet, obtaini...
Dimitris Achlioptas, Aaron Clauset, David Kempe, C...
STOC
2004
ACM
158views Algorithms» more  STOC 2004»
16 years 6 months ago
Collective asynchronous reading with polylogarithmic worst-case overhead
The Collect problem for an asynchronous shared-memory system has the objective for the processors to learn all values of a collection of shared registers, while minimizing the tot...
Bogdan S. Chlebus, Dariusz R. Kowalski, Alexander ...
STOC
2004
ACM
121views Algorithms» more  STOC 2004»
16 years 6 months ago
Lower bounds for dynamic connectivity
We prove an (lg n) cell-probe lower bound on maintaining connectivity in dynamic graphs, as well as a more general trade-off between updates and queries. Our bound holds even if t...
Mihai Patrascu, Erik D. Demaine