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JCC
2007
121views more  JCC 2007»
15 years 6 months ago
Speeding up parallel GROMACS on high-latency networks
: We investigate the parallel scaling of the GROMACS molecular dynamics code on Ethernet Beowulf clusters and what prerequisites are necessary for decent scaling even on such clust...
Carsten Kutzner, David van der Spoel, Martin Fechn...
BIOINFORMATICS
2004
41views more  BIOINFORMATICS 2004»
15 years 6 months ago
Speeding up whole-genome alignment by indexing frequency vectors
Tamer Kahveci, Vebjorn Ljosa, Ambuj K. Singh
COMGEO
2004
ACM
15 years 6 months ago
Speeding up the incremental construction of the union of geometric objects in practice
We present a new incremental algorithm for constructing the union of n triangles in the plane. In our experiments, the new algorithm, which we call the Disjoint-Cover (DC) algorit...
Eti Ezra, Dan Halperin, Micha Sharir
156
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AIEDAM
1998
87views more  AIEDAM 1998»
15 years 5 months ago
Learning to set up numerical optimizations of engineering designs
Gradient-based numerical optimization of complex engineering designs offers the promise of rapidly producing better designs. However, such methods generally assume that the object...
Mark Schwabacher, Thomas Ellman, Haym Hirsh