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WCRE
2000
IEEE
15 years 11 months ago
A Structured Demonstration of Five Program Comprehension Tools: Lessons Learnt
The purpose of this panel is to report on a structured demonstration for comparing program comprehension tools. Five program comprehension tool designers applied their tools to a ...
Susan Elliott Sim, Margaret-Anne D. Storey, Andrea...
BMCBI
2007
99views more  BMCBI 2007»
15 years 6 months ago
Flexible mapping of homology onto structure with Homolmapper
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
Nathan C. Rockwell, J. Clark Lagarias
BMCBI
2008
130views more  BMCBI 2008»
15 years 6 months ago
Structural descriptor database: a new tool for sequence-based functional site prediction
Background: The Structural Descriptor Database (SDDB) is a web-based tool that predicts the function of proteins and functional site positions based on the structural properties o...
Juliana S. Bernardes, Jorge H. Fernandez, Ana Tere...
BMCBI
2006
159views more  BMCBI 2006»
15 years 6 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
BMCBI
2004
122views more  BMCBI 2004»
15 years 6 months ago
A comprehensive comparison of comparative RNA structure prediction approaches
Background: An increasing number of researchers have released novel RNA structure analysis and prediction algorithms for comparative approaches to structure prediction. Yet, indep...
Paul P. Gardner, Robert Giegerich