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FSS
2008
130views more  FSS 2008»
15 years 6 months ago
A fuzzy k-partitions model for categorical data and its comparison to the GoM model
The grade of membership (GoM) model uses fuzzy sets as memberships of each individual to extreme profiles (or classes) on the likelihood function of multivariate multinomial distr...
Miin-Shen Yang, Yu-Hsuan Chiang, Chiu-Chi Chen, Ch...
BMCBI
2006
145views more  BMCBI 2006»
15 years 6 months ago
Querying the public databases for sequences using complex keywords contained in the feature lines
Background: High throughput technologies often require the retrieval of large data sets of sequences. Retrieval of EMBL or GenBank entries using keywords is easy using tools such ...
Olivier Croce, Michaël Lamarre, Richard Chris...
BMCBI
2006
166views more  BMCBI 2006»
15 years 6 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2006
139views more  BMCBI 2006»
15 years 6 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
BMCBI
2006
129views more  BMCBI 2006»
15 years 6 months ago
Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps
Background: Protein sequence alignment is one of the basic tools in bioinformatics. Correct alignments are required for a range of tasks including the derivation of phylogenetic t...
Tomas Ohlson, Varun Aggarwal, Arne Elofsson, Rober...
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