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BMCBI
2008
95views more  BMCBI 2008»
15 years 6 months ago
Mining protein networks for synthetic genetic interactions
Background: The local connectivity and global position of a protein in a protein interaction network are known to correlate with some of its functional properties, including its e...
Sri R. Paladugu, Shan Zhao, Animesh Ray, Alpan Rav...
CORR
2008
Springer
158views Education» more  CORR 2008»
15 years 6 months ago
Declarative Combinatorics: Isomorphisms, Hylomorphisms and Hereditarily Finite Data Types in Haskell
This paper is an exploration in a functional programming framework of isomorphisms between elementary data types (natural numbers, sets, finite functions, permutations binary deci...
Paul Tarau
BMCBI
2006
136views more  BMCBI 2006»
15 years 6 months ago
Metric for Measuring the Effectiveness of Clustering of DNA Microarray Expression
Background: The recent advancement of microarray technology with lower noise and better affordability makes it possible to determine expression of several thousand genes simultane...
Raja Loganantharaj, Satish Cheepala, John Clifford
BMCBI
2006
103views more  BMCBI 2006»
15 years 6 months ago
Cis-motifs upstream of the transcription and translation initiation sites are effectively revealed by their positional disequili
Background: The discovery of cis-regulatory motifs still remains a challenging task even though the number of sequenced genomes is constantly growing. Computational analyses using...
Kenneth W. Berendzen, Kurt Stüber, Klaus Hart...
JAIR
2006
179views more  JAIR 2006»
15 years 6 months ago
The Fast Downward Planning System
Fast Downward is a classical planning system based on heuristic search. It can deal with general deterministic planning problems encoded in the propositional fragment of PDDL2.2, ...
Malte Helmert