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BMCBI
2010
143views more  BMCBI 2010»
15 years 4 months ago
A genome alignment algorithm based on compression
Background: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of th...
Minh Duc Cao, Trevor I. Dix, Lloyd Allison
DEBU
2010
152views more  DEBU 2010»
15 years 4 months ago
Implementing an Append-Only Interface for Semiconductor Storage
Solid-state disks are currently based on NAND flash and expose a standard disk interface. To accommodate limitations of the medium, solid-state disk implementations avoid rewritin...
Colin W. Reid, Philip A. Bernstein
TCBB
2010
108views more  TCBB 2010»
15 years 1 months ago
Identification of Full and Partial Class Relevant Genes
Multiclass cancer classification on microarray data has provided the feasibility of cancer diagnosis across all of the common malignancies in parallel. Using multiclass cancer feat...
Zexuan Zhu, Yew-Soon Ong, Jacek M. Zurada
BMCBI
2011
14 years 10 months ago
Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis
Background: Orthology analysis is an important part of data analysis in many areas of bioinformatics such as comparative genomics and molecular phylogenetics. The ever-increasing ...
Marcus Lechner, Sven Findeiß, Lydia Steiner,...
BMCBI
2011
14 years 10 months ago
Efficient alignment of pyrosequencing reads for re-sequencing applications
Background: Over the past few years, new massively parallel DNA sequencing technologies have emerged. These platforms generate massive amounts of data per run, greatly reducing th...
Francisco Fernandes, Paulo G. S. da Fonseca, Lu&ia...
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