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BMCBI
2010
118views more  BMCBI 2010»
15 years 6 months ago
Predicting nucleosome positioning using a duration Hidden Markov Model
Background: The nucleosome is the fundamental packing unit of DNAs in eukaryotic cells. Its detailed positioning on the genome is closely related to chromosome functions. Increasi...
Liqun Xi, Yvonne Fondufe-Mittendorf, Lei Xia, Jare...
JCSS
2008
81views more  JCSS 2008»
15 years 6 months ago
A simulator for adaptive parallel applications
Dynamically allocating computing nodes to parallel applications is a promising technique for improving the utilization of cluster resources. Detailed simulations can help identify...
Basile Schaeli, Sebastian Gerlach, Roger D. Hersch
PLDI
2005
ACM
16 years 8 days ago
Mitosis compiler: an infrastructure for speculative threading based on pre-computation slices
Speculative parallelization can provide significant sources of additional thread-level parallelism, especially for irregular applications that are hard to parallelize by conventio...
Carlos García Quiñones, Carlos Madri...
SIGMOD
2012
ACM
253views Database» more  SIGMOD 2012»
13 years 9 months ago
Skew-aware automatic database partitioning in shared-nothing, parallel OLTP systems
The advent of affordable, shared-nothing computing systems portends a new class of parallel database management systems (DBMS) for on-line transaction processing (OLTP) applicatio...
Andrew Pavlo, Carlo Curino, Stanley B. Zdonik
182
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CASES
2007
ACM
15 years 10 months ago
Performance optimal processor throttling under thermal constraints
We derive analytically, the performance optimal throttling curve for a processor under thermal constraints for a given task sequence. We found that keeping the chip temperature co...
Ravishankar Rao, Sarma B. K. Vrudhula