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BIOINFORMATICS
2007
66views more  BIOINFORMATICS 2007»
15 years 6 months ago
Gene expression network analysis and applications to immunology
We address the problem of using expression data and prior biological knowledge to identify differentially expressed pathways or groups of genes. Following an idea of Ideker et al...
Serban Nacu, Rebecca Critchley-Thorne, Peter Lee, ...
BMCBI
2010
124views more  BMCBI 2010»
15 years 6 months ago
A Dynamic Noise Level Algorithm for Spectral Screening of Peptide MS/MS Spectra
Background: High-throughput shotgun proteomics data contain a significant number of spectra from non-peptide ions or spectra of too poor quality to obtain highly confident peptide...
Hua Xu, Michael A. Freitas
BMCBI
2007
160views more  BMCBI 2007»
15 years 6 months ago
Dendroscope: An interactive viewer for large phylogenetic trees
Background: Research in evolution requires software for visualizing and editing phylogenetic trees, for increasingly very large datasets, such as arise in expression analysis or m...
Daniel H. Huson, Daniel C. Richter, Christian Raus...
CORR
2010
Springer
101views Education» more  CORR 2010»
15 years 6 months ago
Model-Driven Constraint Programming
Constraint programming can definitely be seen as a model-driven paradigm. The users write programs for modeling problems. These programs are mapped to executable models to calcula...
Raphaël Chenouard, Laurent Granvilliers, Rica...
CORR
2010
Springer
130views Education» more  CORR 2010»
15 years 6 months ago
Towards Adaptable and Adaptive Policy-Free Middleware
We believe that to fully support adaptive distributed applications, middleware must itself be adaptable, adaptive and policy-free. In this paper we present a new language-independ...
Alan Dearle, Graham N. C. Kirby, Stuart J. Norcros...
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