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BMCBI
2010
117views more  BMCBI 2010»
15 years 6 months ago
Better score function for peptide identification with ETD MS/MS spectra
Background: Tandem mass spectrometry (MS/MS) has become the primary way for protein identification in proteomics. A good score function for measuring the match quality between a p...
Xiaowen Liu, Baozhen Shan, Lei Xin, Bin Ma
BMCBI
2004
110views more  BMCBI 2004»
15 years 6 months ago
Tools for loading MEDLINE into a local relational database
Background: Researchers who use MEDLINE for text mining, information extraction, or natural language processing may benefit from having a copy of MEDLINE that they can manage loca...
Diane E. Oliver, Gaurav Bhalotia, Ariel S. Schwart...
SIGSOFT
2010
ACM
15 years 4 months ago
BERT: a tool for behavioral regression testing
During maintenance, software is modified and evolved to enhance its functionality, eliminate faults, and adapt it to changed or new platforms. In this demo, we present BERT, a too...
Wei Jin, Alessandro Orso, Tao Xie
ICSE
2009
IEEE-ACM
16 years 7 months ago
Refactoring sequential Java code for concurrency via concurrent libraries
Parallelizing existing sequential programs to run efficiently on multicores is hard. The Java 5 package java.util.concurrent (j.u.c.) supports writing concurrent programs: much of...
Danny Dig, John Marrero, Michael D. Ernst
SIGSOFT
2006
ACM
16 years 7 months ago
Finding failure-inducing changes in java programs using change classification
Testing and code editing are interleaved activities during program development. When tests fail unexpectedly, the changes that caused the failure(s) are not always easy to find. W...
Barbara G. Ryder, Frank Tip, Maximilian Störz...