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BMCBI
2005
152views more  BMCBI 2005»
15 years 6 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
BMCBI
2007
147views more  BMCBI 2007»
15 years 6 months ago
Improved residue contact prediction using support vector machines and a large feature set
Background: Predicting protein residue-residue contacts is an important 2D prediction task. It is useful for ab initio structure prediction and understanding protein folding. In s...
Jianlin Cheng, Pierre Baldi
SEKE
2005
Springer
15 years 11 months ago
Using Ontologies to Add Semantics to a Software Engineering Environment
Software Engineering Environments (SEEs) are systems designed to support software development and maintenance, and also for supporting project control and management. They provide ...
Ricardo de Almeida Falbo, Fabiano Borges Ruy, Rodr...
BMCBI
2010
105views more  BMCBI 2010»
15 years 6 months ago
GWAMA: software for genome-wide association meta-analysis
Background: Despite the recent success of genome-wide association studies in identifying novel loci contributing effects to complex human traits, such as type 2 diabetes and obesi...
Reedik Mägi, Andrew P. Morris
ICSE
1997
IEEE-ACM
15 years 10 months ago
Prioritizing Software Requirements in an Industrial Setting
The planning of additional featuresand releases is a major concem for commercialsoftware companies. We describe how, in collaboration with Ericsson Radio Systems, we developed and...
Kevin Ryan, Joachim Karlsson