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BMCBI
2006
163views more  BMCBI 2006»
15 years 6 months ago
Ensemble attribute profile clustering: discovering and characterizing groups of genes with similar patterns of biological featur
Background: Ensemble attribute profile clustering is a novel, text-based strategy for analyzing a userdefined list of genes and/or proteins. The strategy exploits annotation data ...
J. R. Semeiks, A. Rizki, Mina J. Bissell, I. Saira...
BMCBI
2006
161views more  BMCBI 2006»
15 years 6 months ago
A method for rapid similarity analysis of RNA secondary structures
Background: Owing to the rapid expansion of RNA structure databases in recent years, efficient methods for structure comparison are in demand for function prediction and evolution...
Na Liu, Tianming Wang
CSDA
2007
116views more  CSDA 2007»
15 years 6 months ago
Exploring the state sequence space for hidden Markov and semi-Markov chains
The knowledge of the state sequences that explain a given observed sequence for a known hidden Markovian model is the basis of various methods that may be divided into three categ...
Yann Guédon
FMSD
2007
110views more  FMSD 2007»
15 years 6 months ago
Exploiting interleaving semantics in symbolic state-space generation
Symbolic techniques based on Binary Decision Diagrams (BDDs) are widely employed for reasoning about temporal properties of hardware circuits and synchronous controllers. However, ...
Gianfranco Ciardo, Gerald Lüttgen, Andrew S. ...
SIAMSC
2008
113views more  SIAMSC 2008»
15 years 6 months ago
An Efficient and Robust Method for Simulating Two-Phase Gel Dynamics
We develop a computational method for simulating models of gel dynamics where the gel is described by two phases, a networked polymer and a fluid solvent. The models consist of tra...
Grady B. Wright, Robert D. Guy, Aaron L. Fogelson
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