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BMCBI
2007
131views more  BMCBI 2007»
15 years 6 months ago
Prediction of peptides observable by mass spectrometry applied at the experimental set level
Background: When proteins are subjected to proteolytic digestion and analyzed by mass spectrometry using a method such as 2D LC MS/MS, only a portion of the proteotypic peptides a...
William S. Sanders, Susan M. Bridges, Fiona M. McC...
SOFSEM
2004
Springer
15 years 11 months ago
Approaches Based on Markovian Architectural Bias in Recurrent Neural Networks
Recent studies show that state-space dynamics of randomly initialized recurrent neural network (RNN) has interesting and potentially useful properties even without training. More p...
Matej Makula, Michal Cernanský, Lubica Benu...
NIPS
2008
15 years 7 months ago
Partially Observed Maximum Entropy Discrimination Markov Networks
Learning graphical models with hidden variables can offer semantic insights to complex data and lead to salient structured predictors without relying on expensive, sometime unatta...
Jun Zhu, Eric P. Xing, Bo Zhang
BMCBI
2010
150views more  BMCBI 2010»
15 years 6 months ago
AMS 3.0: prediction of post-translational modifications
Background: We present here the recent update of AMS algorithm for identification of post-translational modification (PTM) sites in proteins based only on sequence information, us...
Subhadip Basu, Dariusz Plewczynski
ICDE
2006
IEEE
163views Database» more  ICDE 2006»
16 years 7 months ago
A Sampling-Based Approach to Optimizing Top-k Queries in Sensor Networks
Wireless sensor networks generate a vast amount of data. This data, however, must be sparingly extracted to conserve energy, usually the most precious resource in battery-powered ...
Adam Silberstein, Carla Schlatter Ellis, Jun Yang ...