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JCC
2008
132views more  JCC 2008»
15 years 6 months ago
The implementation of a fast and accurate QM/MM potential method in Amber
Abstract: Version 9 of the Amber simulation programs includes a new semi-empirical hybrid QM/MM functionality. This includes support for implicit solvent (generalized Born) and for...
Ross C. Walker, Michael F. Crowley, David A. Case
VIS
2004
IEEE
218views Visualization» more  VIS 2004»
16 years 8 months ago
Pixel-Exact Rendering of Spacetime Finite Element Solutions
Computational simulation of time-varying physical processes is of fundamental importance for many scientific and engineering applications. Most frequently, time-varying simulation...
Michael Garland, Robert Haber, Yuan Zhou
CDC
2010
IEEE
141views Control Systems» more  CDC 2010»
15 years 1 months ago
Hybrid moment computation algorithm for biochemical reaction networks
Moment computation is essential to the analysis of stochastic kinetic models of biochemical reaction networks. It is often the case that the moment evolution, usually the first and...
Yun-Bo Zhao, Jongrae Kim, João Pedro Hespan...
ISCA
2010
IEEE
199views Hardware» more  ISCA 2010»
15 years 11 months ago
A case for FAME: FPGA architecture model execution
Given the multicore microprocessor revolution, we argue that the architecture research community needs a dramatic increase in simulation capacity. We believe FPGA Architecture Mod...
Zhangxi Tan, Andrew Waterman, Henry Cook, Sarah Bi...
WSC
1997
15 years 8 months ago
Arena Software Tutorial
The Arena modeling system from Systems Modeling Corporation is a flexible and powerful tool that allows analysts to create animated simulation models that accurately represent vir...
David A. Takus, David M. Profozich