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» Similarity of Event Sequences
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RECOMB
2006
Springer
16 years 7 months ago
Domain Architecture in Homolog Identification
Homology identification is the first step for many genomic studies. Current methods, based on sequence comparison, can result in a substantial number of mis-assignments due to the ...
Nan Song, R. D. Sedgewick, Dannie Durand
VLDB
2007
ACM
121views Database» more  VLDB 2007»
16 years 6 months ago
Ranked Subsequence Matching in Time-Series Databases
Existing work on similar sequence matching has focused on either whole matching or range subsequence matching. In this paper, we present novel methods for ranked subsequence match...
Wook-Shin Han, Jinsoo Lee, Yang-Sae Moon, Haifeng ...
WABI
2007
Springer
110views Bioinformatics» more  WABI 2007»
16 years 22 days ago
Haplotype Inference Via Hierarchical Genotype Parsing
The within-species genetic variation due to recombinations leads to a mosaic-like structure of DNA. This structure can be modeled, e.g. by parsing sample sequences of current DNA w...
Pasi Rastas, Esko Ukkonen
NAR
2011
236views Computer Vision» more  NAR 2011»
14 years 9 months ago
The catfish genome database cBARBEL: an informatic platform for genome biology of ictalurid catfish
The catfish genome database, cBARBEL (abbreviated from catfish Breeder And Researcher Bioinformatics Entry Location) is an online open-access database for genome biology of ictalu...
Jianguo Lu, Eric Peatman, Qing Yang, Shaolin Wang,...
DAWAK
2007
Springer
16 years 24 days ago
What-If Analysis for Data Warehouse Evolution
In this paper, we deal with the problem of performing what-if analysis for changes that occur in the schema/structure of the data warehouse We abstract software modules, queries, r...
George Papastefanatos, Panos Vassiliadis, Alkis Si...