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GCB
2004
Springer
223views Biometrics» more  GCB 2004»
15 years 10 months ago
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays
: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs. In this paper, we present a new nonheuristic algorithm, ...
Michael Beckstette, Dirk Strothmann, Robert Homann...
NAR
2007
152views more  NAR 2007»
15 years 6 months ago
COMPASS server for remote homology inference
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....
ICASSP
2009
IEEE
16 years 1 months ago
Long-time span acoustic activity analysis from far-field sensors in smart homes
Smart homes for the aging population have recently started attracting the attention of the research community. One of the problems of interest is this of monitoring the activities...
Jing Huang, Xiaodan Zhuang, Vit Libal, Gerasimos P...
IANDC
2011
148views more  IANDC 2011»
15 years 1 months ago
Building species trees from larger parts of phylogenomic databases
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...
Celine Scornavacca, Vincent Berry, Vincent Ranwez
ICML
2004
IEEE
16 years 7 months ago
Distribution kernels based on moments of counts
Many applications in text and speech processing require the analysis of distributions of variable-length sequences. We recently introduced a general kernel framework, rational ker...
Corinna Cortes, Mehryar Mohri