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» Similarity Queries on Structured Data in Structured Overlays
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BMCBI
2008
123views more  BMCBI 2008»
15 years 6 months ago
PocketMatch: A new algorithm to compare binding sites in protein structures
Background: Recognizing similarities and deriving relationships among protein molecules is a fundamental requirement in present-day biology. Similarities can be present at various...
Kalidas Yeturu, Nagasuma Chandra
CIKM
2005
Springer
16 years 1 days ago
Versatile structural disambiguation for semantic-aware applications
In this paper, we propose a versatile disambiguation approach which can be used to make explicit the meaning of structure based information such as XML schemas, XML document struc...
Federica Mandreoli, Riccardo Martoglia, Enrico Ron...
WADS
2009
Springer
268views Algorithms» more  WADS 2009»
16 years 1 months ago
Succinct Orthogonal Range Search Structures on a Grid with Applications to Text Indexing
We present a succinct representation of a set of n points on an n × n grid using n lg n + o(n lg n) bits3 to support orthogonal range counting in O(lg n/ lg lg n) time, and range ...
Prosenjit Bose, Meng He, Anil Maheshwari, Pat Mori...
WABI
2009
Springer
102views Bioinformatics» more  WABI 2009»
16 years 1 months ago
A Tree Based Method for the Rapid Screening of Chemical Fingerprints
Background: The fingerprint of a molecule is a bitstring based on its structure, constructed such that structurally similar molecules will have similar fingerprints. Molecular fin...
Thomas G. Kristensen, Jesper Nielsen, Christian N....
SIGMOD
2002
ACM
134views Database» more  SIGMOD 2002»
16 years 6 months ago
QURSED: querying and reporting semistructured data
QURSED enables the development of web-based query forms and reports (QFRs) that query and report semistructured XML data, i.e., data that are characterized by nesting, irregularit...
Yannis Papakonstantinou, Michalis Petropoulos, Vas...