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BMCBI
2006
153views more  BMCBI 2006»
15 years 6 months ago
2DDB - a bioinformatics solution for analysis of quantitative proteomics data
Background: We present 2DDB, a bioinformatics solution for storage, integration and analysis of quantitative proteomics data. As the data complexity and the rate with which it is ...
Lars Malmström, György Marko-Varga, Guni...
BMCBI
2004
111views more  BMCBI 2004»
15 years 6 months ago
The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases
Background: The Hotdog fold was initially identified in the structure of Escherichia coli FabA and subsequently in 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. strain CB...
Shane C. Dillon, Alex Bateman
ISMB
1997
15 years 7 months ago
Enumerating and Ranking Discrete Motifs
Discrete motifsthat discriminate functionalclasses of proteins are useful for classifying newsequences, capturingstructural constraints, andidentifyingprotein subclasses.Despiteth...
Craig G. Nevill-Manning, Komal S. Sethi, Thomas D....
BMCBI
2008
134views more  BMCBI 2008»
15 years 6 months ago
PEPOP: Computational design of immunogenic peptides
Background: Most methods available to predict protein epitopes are sequence based. There is a need for methods using 3D information for prediction of discontinuous epitopes and de...
Violaine Moreau, Cécile Fleury, Dominique P...
NAR
2011
197views Computer Vision» more  NAR 2011»
14 years 9 months ago
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
AmoebaDB (http://AmoebaDB.org) and MicrosporidiaDB (http://MicrosporidiaDB.org) are new functional genomic databases serving the amoebozoa and microsporidia research communities, ...
Cristina Aurrecoechea, Ana Barreto, John Brestelli...