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PAMI
1998
87views more  PAMI 1998»
15 years 6 months ago
Learning Local Languages and Their Application to DNA Sequence Analysis
—This paper concerns an efficient algorithm for learning in the limit a special type of regular languages called strictly locally testable languages from positive data, and its a...
Takashi Yokomori, Satoshi Kobayashi
NAR
2002
85views more  NAR 2002»
15 years 6 months ago
CKAAPs DB: a Conserved Key Amino Acid Positions DataBase
The Conserved Key Amino Acid Positions DataBase (CKAAPs DB) provides access to an analysis of structurally similar proteins with dissimilar sequences where key residues within a c...
Wilfred W. Li, Boojala V. B. Reddy, John G. Tate, ...
JBCB
2010
138views more  JBCB 2010»
15 years 1 months ago
Hierarchical Classification of Gene Ontology Terms Using the Gostruct Method
Protein function prediction is an active area of research in bioinformatics. And yet, transfer of annotation on the basis of sequence or structural similarity remains widely used ...
Artem Sokolov, Asa Ben-Hur
CIBCB
2009
IEEE
15 years 7 months ago
An application of the metric access methods to the mass spectrometry data
Mass spectrometry is a very popular method for protein and peptide identification nowadays. Abundance of data generated in this way grows exponentially every year and although ther...
Jiri Novák, David Hoksza
GCB
1998
Springer
112views Biometrics» more  GCB 1998»
15 years 10 months ago
Combining diverse evidence for gene recognition in completely sequenced bacterial genomes
Analysis of a newly sequenced bacterial genome starts with identification of protein-coding genes. Functional assignment of proteins requires the exact knowledge of protein N-term...
Dmitrij Frishman, Andrey A. Mironov, Hans-Werner M...