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» Sequences of Level 1, 2, 3, ..., k , ..
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BMCBI
2008
77views more  BMCBI 2008»
15 years 6 months ago
SeqAn An efficient, generic C++ library for sequence analysis
Background: The use of novel algorithmic techniques is pivotal to many important problems in life science. For example the sequencing of the human genome [1] would not have been p...
Andreas Döring, David Weese, Tobias Rausch, K...
BMCBI
2008
128views more  BMCBI 2008»
15 years 6 months ago
Efficient computation of absent words in genomic sequences
Background: Analysis of sequence composition is a routine task in genome research. Organisms are characterized by their base composition, dinucleotide relative abundance, codon us...
Julia Herold, Stefan Kurtz, Robert Giegerich
RSA
2008
89views more  RSA 2008»
15 years 5 months ago
Simple permutations mix even better
We study the random composition of a small family of O(n3 ) simple permutations on {0, 1}n . Specifically we ask how many randomly selected simple permutations need be composed to...
Alex Brodsky, Shlomo Hoory
SIAMJO
2000
113views more  SIAMJO 2000»
15 years 6 months ago
Cones of Matrices and Successive Convex Relaxations of Nonconvex Sets
Let F be a compact subset of the n-dimensional Euclidean space Rn represented by (finitely or infinitely many) quadratic inequalities. We propose two methods, one based on successi...
Masakazu Kojima, Levent Tunçel
DM
2007
77views more  DM 2007»
15 years 6 months ago
Quadrangularly connected claw-free graphs
A graph G is quadrangularly connected if for every pair of edges e1 and e2 in E(G), G has a sequence of l-cycles (3 ≤ l ≤ 4)
MingChu Li, Cheng Guo, Liming Xiong, Dengxin Li, H...