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» Sequence Comparison Using a Relational Database Approach
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ECAI
2010
Springer
15 years 7 months ago
Extraction of Places Related to Flickr Tags
Geographic information systems use databases to map keywords to places. These databases are currently most often created by using a top-down approach based on the geographic defini...
Yukino Baba, Fuyuki Ishikawa, Shinichi Honiden
TITB
2008
204views more  TITB 2008»
15 years 5 months ago
A Cryptographic Approach to Securely Share and Query Genomic Sequences
To support large-scale biomedical research projects, organizations need to share person-specific genomic sequences without violating the privacy of their data subjects. In the past...
Murat Kantarcioglu, Wei Jiang, Ying Liu, Bradley M...
NAR
2007
90views more  NAR 2007»
15 years 5 months ago
The SUPERFAMILY database in 2007: families and functions
The SUPERFAMILY database provides protein domain assignments, at the SCOP ‘superfamily’ level, for the predicted protein sequences in over 400 completed genomes. A superfamily...
Derek Wilson, Martin Madera, Christine Vogel, Cyru...
ACL
2011
14 years 9 months ago
Using Derivation Trees for Treebank Error Detection
This work introduces a new approach to checking treebank consistency. Derivation trees based on a variant of Tree Adjoining Grammar are used to compare the annotation of word sequ...
Seth Kulick, Ann Bies, Justin Mott
BMCBI
2007
106views more  BMCBI 2007»
15 years 6 months ago
Constructing a meaningful evolutionary average at the phylogenetic center of mass
Background: As a consequence of the evolutionary process, data collected from related species tend to be similar. This similarity by descent can obscure subtler signals in the dat...
Eric A. Stone, Arend Sidow