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WABI
2007
Springer
139views Bioinformatics» more  WABI 2007»
16 years 1 days ago
Computability of Models for Sequence Assembly
Graph-theoretic models have come to the forefront as some of the most powerful and practical methods for sequence assembly. Simultaneously, the computational hardness of the underl...
Paul Medvedev, Konstantinos Georgiou, Gene Myers, ...
DAC
2006
ACM
15 years 12 months ago
High-performance operating system controlled memory compression
This article describes a new software-based on-line memory compression algorithm for embedded systems and presents a method of adaptively managing the uncompressed and compressed ...
Lei Yang, Haris Lekatsas, Robert P. Dick
BMCBI
2010
142views more  BMCBI 2010»
15 years 6 months ago
Classification of protein sequences by means of irredundant patterns
Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
Matteo Comin, Davide Verzotto
BMCBI
2008
119views more  BMCBI 2008»
15 years 6 months ago
A new method for 2D gel spot alignment: application to the analysis of large sample sets in clinical proteomics
Background: In current comparative proteomics studies, the large number of images generated by 2D gels is currently compared using spot matching algorithms. Unfortunately, differe...
Sabine Pérès, Laurence Molina, Nicol...
KDD
2000
ACM
149views Data Mining» more  KDD 2000»
15 years 9 months ago
Efficient clustering of high-dimensional data sets with application to reference matching
Many important problems involve clustering large datasets. Although naive implementations of clustering are computationally expensive, there are established efficient techniques f...
Andrew McCallum, Kamal Nigam, Lyle H. Ungar