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BMCBI
2010
175views more  BMCBI 2010»
15 years 6 months ago
Calibur: a tool for clustering large numbers of protein decoys
Background: Ab initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. The decoy with the most number of neighbors of...
Shuai Cheng Li, Yen Kaow Ng
BMCBI
2010
116views more  BMCBI 2010»
15 years 6 months ago
Optimization algorithms for functional deimmunization of therapeutic proteins
Background: To develop protein therapeutics from exogenous sources, it is necessary to mitigate the risks of eliciting an anti-biotherapeutic immune response. A key aspect of the ...
Andrew S. Parker, Wei Zheng, Karl E. Griswold, Chr...
BMCBI
2007
120views more  BMCBI 2007»
15 years 6 months ago
Recognition of interferon-inducible sites, promoters, and enhancers
Background: Computational analysis of gene regulatory regions is important for prediction of functions of many uncharacterized genes. With this in mind, search of the target genes...
Elena A. Ananko, Yury V. Kondrakhin, Tatyana I. Me...
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TCSV
2008
139views more  TCSV 2008»
15 years 6 months ago
A Fast MB Mode Decision Algorithm for MPEG-2 to H.264 P-Frame Transcoding
Abstract--The H.264 standard achieves much higher coding efficiency than the MPEG-2 standard, due to its improved inter-and intra-prediction modes at the expense of higher computat...
Gerardo Fernández-Escribano, Hari Kalva, Pe...
PVLDB
2008
138views more  PVLDB 2008»
15 years 6 months ago
A skip-list approach for efficiently processing forecasting queries
Time series data is common in many settings including scientific and financial applications. In these applications, the amount of data is often very large. We seek to support pred...
Tingjian Ge, Stanley B. Zdonik