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BMCBI
2004
150views more  BMCBI 2004»
15 years 6 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
AOSD
2007
ACM
15 years 10 months ago
Using natural language program analysis to locate and understand action-oriented concerns
Most current software systems contain undocumented high-level ideas implemented across multiple files and modules. When developers perform program maintenance tasks, they often wa...
David Shepherd, Zachary P. Fry, Emily Hill, Lori L...
BMCBI
2008
208views more  BMCBI 2008»
15 years 6 months ago
GraphFind: enhancing graph searching by low support data mining techniques
Background: Biomedical and chemical databases are large and rapidly growing in size. Graphs naturally model such kinds of data. To fully exploit the wealth of information in these...
Alfredo Ferro, Rosalba Giugno, Misael Mongiov&igra...
ICIC
2009
Springer
16 years 28 days ago
A Method for Multiple Sequence Alignment Based on Particle Swarm Optimization
Sequence Alignment is a basic information disposal method in Bioinformatics. However, it is difficult to deal with multiple sequence alignment problem(MSA). In this paper, an impro...
Fasheng Xu, Yuehui Chen
PPSN
2010
Springer
15 years 4 months ago
Globally Induced Model Trees: An Evolutionary Approach
In the paper we propose a new evolutionary algorithm for induction of univariate regression trees that associate leaves with simple linear regression models. In contrast to typical...
Marcin Czajkowski, Marek Kretowski