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BMCBI
2004
228views more  BMCBI 2004»
15 years 6 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
BMCBI
2004
134views more  BMCBI 2004»
15 years 6 months ago
Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE)
Background: An important challenge for transcript counting methods such as Serial Analysis of Gene Expression (SAGE), "Digital Northern" or Massively Parallel Signature ...
Ricardo Z. N. Vêncio, Helena Brentani, Diogo...
BMCBI
2002
136views more  BMCBI 2002»
15 years 6 months ago
Making sense of EST sequences by CLOBBing them
Background: Expressed sequence tags (ESTs) are single pass reads from randomly selected cDNA clones. They provide a highly cost-effective method to access and identify expressed g...
John Parkinson, David B. Guiliano, Mark L. Blaxter
TIT
1998
216views more  TIT 1998»
15 years 6 months ago
Data Compression and Harmonic Analysis
In this article we review some recent interactions between harmonic analysis and data compression. The story goes back of course to Shannon’s R(D) theory in the case of Gaussian...
David L. Donoho, Martin Vetterli, Ronald A. DeVore...
BMCBI
2010
81views more  BMCBI 2010»
15 years 6 months ago
Empirical Bayes Analysis of Sequencing-based Transcriptional Profiling without Replicates
Background: Recent technological advancements have made high throughput sequencing an increasingly popular approach for transcriptome analysis. Advantages of sequencing-based tran...
Zhijin Wu, Bethany D. Jenkins, Tatiana A. Rynearso...