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» Rewriting of Regular Expressions and Regular Path Queries
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BMCBI
2006
153views more  BMCBI 2006»
15 years 6 months ago
The 3of5 web application for complex and comprehensive pattern matching in protein sequences
Background: The identification of patterns in biological sequences is a key challenge in genome analysis and in proteomics. Frequently such patterns are complex and highly variabl...
Markus Seiler, Alexander Mehrle, Annemarie Poustka...
POPL
2004
ACM
16 years 6 months ago
Incremental execution of transformation specifications
We aim to specify program transformations in a declarative style, and then to generate executable program transformers from such specifications. Many transformations require non-t...
Ganesh Sittampalam, Oege de Moor, Ken Friis Larsen
IPMI
2007
Springer
16 years 6 months ago
Inter and Intra-modal Deformable Registration: Continuous Deformations Meet Efficient Optimal Linear Programming
In this paper we propose a novel non-rigid volume registration based on discrete labeling and linear programming. The proposed framework reformulates registration as a minimal path...
Ben Glocker, Nikos Komodakis, Nikos Paragios, Geor...
PODS
2007
ACM
171views Database» more  PODS 2007»
16 years 6 months ago
The complexity of reasoning about pattern-based XML schemas
In a recent paper, Martens et al. introduced a specification mechanism for XML tree languages, based on rules of the form r s, where r, s are regular expressions. Sets of such ru...
Gjergji Kasneci, Thomas Schwentick
ICCAD
2003
IEEE
140views Hardware» more  ICCAD 2003»
16 years 2 months ago
Block-based Static Timing Analysis with Uncertainty
Static timing analysis is a critical step in design of any digital integrated circuit. Technology and design trends have led to significant increase in environmental and process v...
Anirudh Devgan, Chandramouli V. Kashyap