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» Revisiting the Sequence Constraint
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BMCBI
2005
162views more  BMCBI 2005»
15 years 6 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes
BMCBI
2005
107views more  BMCBI 2005»
15 years 6 months ago
An edit script for taxonomic classifications
Abstract. Taxonomy provides one of the most powerful ways to navigate sequence data bases but currently, users are forced to formulate queries according to a single taxonomic class...
Roderic D. M. Page, Gabriel Valiente
RV
2010
Springer
127views Hardware» more  RV 2010»
15 years 4 months ago
You Should Better Enforce Than Verify
This tutorial deals with runtime enforcement which is an extension of runtime verification aiming to circumvent misbehaviors of systems. After an historical overview of previous a...
Yliès Falcone
ICASSP
2007
IEEE
16 years 22 days ago
Toward Turbo Decoding of RNA Secondary Structure
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
SCALESPACE
2007
Springer
16 years 15 days ago
A Consistent Spatio-temporal Motion Estimator for Atmospheric Layers
In this paper, we address the problem of estimating mesoscale dynamics of atmospheric layers from satellite image sequences. Relying on a physically sound vertical decomposition of...
Patrick Héas, Étienne Mémin, ...