Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Abstract. Taxonomy provides one of the most powerful ways to navigate sequence data bases but currently, users are forced to formulate queries according to a single taxonomic class...
This tutorial deals with runtime enforcement which is an extension of runtime verification aiming to circumvent misbehaviors of systems. After an historical overview of previous a...
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
In this paper, we address the problem of estimating mesoscale dynamics of atmospheric layers from satellite image sequences. Relying on a physically sound vertical decomposition of...