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CIDR
2009
129views Algorithms» more  CIDR 2009»
15 years 7 months ago
Extracting and Querying a Comprehensive Web Database
Recent research in domain-independent information extraction holds the promise of an automatically-constructed structured database derived from the Web. A query system based on th...
Michael J. Cafarella
ICECCS
2010
IEEE
219views Hardware» more  ICECCS 2010»
15 years 6 months ago
Comparison of Six Ways to Extend the Scope of Cheddar to AADL v2 with Osate
Abstract—Cheddar is a framework dedicated to the specification of real-time schedulers, and to their analysis by simulation. It is developed in Ada. Some parts of its modular ar...
Mickaël Kerboeuf, Alain Plantec, Frank Singho...
BMCBI
2010
117views more  BMCBI 2010»
15 years 6 months ago
Automatic, context-specific generation of Gene Ontology slims
Background: The use of ontologies to control vocabulary and structure annotation has added value to genomescale data, and contributed to the capture and re-use of knowledge across...
Melissa J. Davis, Muhammad Shoaib B. Sehgal, Mark ...
BMCBI
2008
135views more  BMCBI 2008»
15 years 6 months ago
Ab-origin: an enhanced tool to identify the sourcing gene segments in germline for rearranged antibodies
Background: In the adaptive immune system, variable regions of immunoglobulin (IG) are encoded by random recombination of variable (V), diversity (D), and joining (J) gene segment...
Xiaojing Wang, Di Wu, SiYuan Zheng, Jing Sun, Lin ...
BMCBI
2006
172views more  BMCBI 2006»
15 years 6 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...